20190410: WB swine sciatic nerve + neuroblastoma neurons (HTB11)

Objective: try to detect CNTN1 in neuroblastoma neurons (HTB11 differentiated), and in swine sciatic nerve lysate.

Samples/wells:

  1. Marker
  2. Recombinant protein CNTN1: 15 ul + 15 ul laemli 2x
  3. Swine ciatic nerve lysate (resuspended in Nicholson): 30 ul
  4. Swine ciatic nerve lysate: 15 ul + 15 ul laemli 2x
  5. Neuroblastoma neurons (lysate done in lysis buffer IP + LSM): 30 ul
  6. Neuroblastoma neurons (lysate done in Nicholson): 30 ul
  7. Neuroblastoma neurons (lysate done in RIPA+laemli 2x): 30 ul
  8. Marker
  9. Neuroblastoma neurons (lysate done in Nicholson): 30 ul
  10. Neuroblastoma neurons (lysate done in Nicholson): 30 ul

Protocol:

  • Prepare the acrylamide gels:
8 % separating gel 4 % stacking gel
Tris pH 8.8 3M: 1.25ml
Acrylamide 40%: 2 ml
H2O: 6.65ml
SDS 20%: 50ul
PSA 10%: 100ul
Temed: 10ul
Tris pH 6.8 2M: 0.75ml
Acrylamide 40%: 1 ml
H2O: 8.25 ml
SDS 20%: 50ul
PSA 10%: 100ul
Temed: 10ul

 

  • Warm the samples at 96ºC for 5 minutes
  • Load samples in the wells (30-40ul per well)
  • Run with running buffer 1x at 20 – 40mA
  • Transfer to a PVDF membrane with Transblot Turbo (using the commercial buffer) –> high proteins protocol (changing the time to 13 min)
  • Blotting: wash the membrane with water and cut it in 2 parts.
    • Blocking: blocking buffer Casein – TBS 1:1 1h
    • Primary antibodies (diluted in Casein-TBS 1:1) –> 1h at RT or overnight at 4ºC:
      • Mb1 (wells 1-7): Ac anti CNTN1 (Goat) 1/500
      • Mb2 (wells 8-9): serum positive control (15-198) 1/100
      • Mb3 (well 10): serum negative control 1/100
    • Wash with TBS-tween0’1% (3×5′)
    • Secondary antibodies 1/7500 (diluted in Casein-TBS tween0’1%): 1h at RT
      • Mb1 (wells 1-7): DAG800
      • Mb2 (wells 8-9): GAH800
      • Mb3 (well 10): GAH800
    • Wash with TBS-tween0’1% 1x (2×5′)
    • Wash with TBS 1x (1×5′)
    • Read with Odyssey equipment

RESULT:

Mb1: we can see a weak band (CNTN1) in the sciatic nerve lysate (with RIPA and Laemmli)
Mb2 and 3: we can see a weak band (CNTN1) in the membrane incubated with 15-198
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